PAPERS | backroots

Linking rhizosphere microbiome composition of wild and domesticated Phaseolus vulgaris to genotypic and root phenotypic traits

Perez-Jaramillo JE , Carrion, VJ Bosse M, Ferrão LFV, De Hollander M, Garcia AAF, Ramirez CA, Mendes R & Raaijmakers, JM. ISME Journal 2017.

Impact of soil heat on reassembly of bacterial communities in the rhizosphere microbiome and plant disease suppression

van der Voort M, Kempenaar M, van Driel M, Raaijmakers JM, Mendes R. Ecology Letters 2016.

Impact of plant domestication on rhizosphere microbiome assembly and functions

Pérez‑Jaramillo JE, Mendes R, Raaijmakers JM. Plant Molecular Biology 2015.

An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota

Mauchline TH, Chedom-Fotso D, Chandra G et al. Environmental Microbiology 2015.

Cross-kingdom similarities in microbiome functions

Mendes R, Raaijmakers JM. ISME J 2015.

Wheat seed embryo excision enables the creation of axenic seedlings and Koch's postulates testing of putative bacterial endophytes

Robinson RJ, Fraaije BA, Clark IM, Jackson RW, Hirsch PR, Mauchline TH. Scientific Reports 2016.

Going back to the roots: the microbial ecology of the rhizosphere

Philippot L, Raaijmakers JM, Lemanceau P, van der Putten WH. Nat Rev Microbiol 2013.

The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms

Mendes R, Garbeva P, Raaijmakers JM. FEMS Microbiol Rev 2013.

Diversity and natural functions of antibiotics produced by beneficial and plant pathogenic bacteria

Raaijmakers JM, Mazzola M. Annu Rev Phytopathol 2012.

Deciphering the rhizosphere microbiome for disease-suppressive bacteria

Mendes R, Kruijt M, de Bruijn I, Dekkers E, van der Voort M, Schneider JH, Piceno YM, DeSantis TZ, Andersen GL, Bakker PA, Raaijmakers JM. Science 2011.

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

Raaijmakers JM, Paulitz TC, Steinberg C, Alabouvette C, Moënne-Loccoz Y. Plant and Soil 2009.

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# the microbiome of indigenous plants and their native habitats #

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